Mid-term, syllabus of Biochem-700: An introduction to Biochemistry and its applications in applied sciences. Introduction to prokaryotic, eukaryotic and archeal cells. Concept of probiotics and prebiotics. Architecture and composition of biomembranes and transportation. Significance and applications of enzymes and co-enzymes. Therapeutic enzymes. Glycobiology, glyco-conjugates and their applications. Tumors and their biomarkers. Programmed cell death.
…. PLUS…. First 150 MCQs from each of chapters 2-3 of the book ” MCQs in Biochemistry”. MCQs from the taught concepts and book chapters will also appear in the exam.
Final exam, syllabus of Biochem-700: Metabolic roles of vitamins and minerals. Metabolism of macromolecules and their regulation. Electron transport chain, ATP synthesis. Photosynthesis. Photorespiration and C4 plants. Energetics of photosynthesis and respiration. Secondary metabolites of plants and their role as bioactive compounds. Biosignalling. Structure of nucleic acids. Flow of genetic information. Post transcriptional and post-translational modifications. Protein folding and misfolding. Protein targeting. Introduction to gene cloning. Genetic engineering and genetically modified organisms. Introduction to bioinformatics and omics (Genomics, Transcripteomics, Proteomics, Metabolomics). Introduction to nanobiotechnology and its applications.
…. PLUS…. First 150 MCQs from each of 2-3, 5, 9 of the book ” MCQs in Biochemistry”. MCQs from the taught concepts and book chapters will also appear in the exam. The mid-term syllabus will be included in the final exam.
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Assignments and presentations:
- The weightage of the assignment and presentation will be decided later.
- Start preparing your presentations and assignments.
- The presentations will also be started right after the mid-term exam.
- PPT file should not contain any designing/colours other than figures and diagrams.
- Slides should be in 16X9 ratio.
- Fonts of all header should be same and of all other text should be same.
- For detailed guidelines about the presentation of research article, visit: https://www.lifesciencesorg.combiochem-720/
- Download the template ppt file to make your presentation. The link is here (copy this link and paste in a new tab).
- Strictly follow the ppt format and it is better if you write and paste your material in the same ppt file.
K. General Question to be asked during presentation
- 1) Pathway or importance of gene/technology/discovery
- 2) Rationale
- 3) Conclusion of the full article
- 4) Conclusion of every figure
- 5) New findings presented in the article
- 6) Applications of the findings
- 7) Future prospective
- 8) Applications of the work
- 9) Principle of every technique used in the research article
Moreover, provide me a printed summary of your article containing the above headings given under ‘K’.
L. During Presentations, for EVERY FIGURE and graph, we may ask:
1. The Principle of the experiment.
2. The Reason for doing the experiment.
3. The Physiological importance of the figure.
4. The Conclusions of the figure
5. Prepare well objectively and subjectively
NO EXCUSE WILL BE ACCEPTED
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Link to download the book ( MCQs in Biochemistry) is here.
Meeting ID: 336 479 908 561
Passcode: aH9EDN
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Microsoft teams will be used whenever online classes will be held. You must make your teams name as follows.
2017-ag-9382 Haidar Iftikhar
2017-ag-10077 Ahmad FarazFirst 150
Biochem-700 CONCEPTS OF BIOCHEMISTRY 3(3-0)
Learning Objectives
The course aims to provide understanding of the core principles and topics of Biochemistry. It enables students to acquire a specialized knowledge and understanding of basic as well as advanced concepts of biochemistry and related sciences.
Theory
An introduction to Biochemistry and its applications in applied sciences. Introduction to prokaryotic, eukaryotic and archeal cells. Concept of probiotics and prebiotics. Architecture and composition of biomembranes and transportation. Significance and applications of enzymes and co-enzymes. Therapeutic enzymes. Glycobiology, glyco-conjugates and their applications. Tumors and their biomarkers. Programmed cell death. Metabolic roles of vitamins and minerals. Metabolism of macromolecules and their regulation. Electron transport chain, ATP synthesis. Photosynthesis. Photorespiration and C4 plants. Energetics of photosynthesis and respiration. Secondary metabolites of plants and their role as bioactive compounds. Biosignalling. Structure of nucleic acids. Flow of genetic information. Post transcriptional and post translational modifications. Protein folding and misfolding. Protein targeting. Introduction to gene cloning. Genetic engineering and genetically modified organisms. Introduction to bioinformatics and omics (Genomics, Transcripteomics, Proteomics, Metabolomics). Introduction to nanobiotechnology and its applications.
Suggested Readings
- Chatterjea, M. N. and R. Shinde. 2011. Textbook of Medical Biochemistry. 8th ed (Indian edition). Jaypee Brothers, Medical Publishers (P) Ltd, New Delhi, India.
- Champe, P.C., R.A. Harvey and D.R. Ferrier. 2014. Biochemistry: Lippincott’s Illustrated Reviews. 6th Lippincott Williams and Wilkins. U.S.A.
- Goodwin, T.W. and E.I.Mercer.2003. Introduction to Plant Biochemistry, 2nd CBS publishers and distributors. New Delhi. India
- Kaufmann, P.B. and W.Wu, L.J. Creke. 2011. Handbook of Molecular and Cellular Methods in Biology and Medicines, 3rd, CRC Press.
- Nelson, D.L and M.M. Cox. 2013. Lehninger Principles of Biochemistry. 6th Worth Publishers, New York, NY, USA.
- Taiz, L. and E. Zeiger. 2015. Plant Physiology 6th Sinauer Associates Inc., USA.
- Voet, D. J.G. Voet and C. W. Pratt. 2011. Fundamentals of Biochemistry. 4th John Wiley and Sons. Inc. New York, NY, USA.
- Weaver, R. F. 2012. Molecular Biology. 5th ed. McGraw Hill Higher Education.
Biochem-700, M.Phil, Morning, Spring 2023, Dr. Muhammad Ali (Section A) 10-02-2023 | |||||
Sr. | Ag No. | Student’s Name | Group # | Topic | Presentation date |
1 | 2015-ag-5313 | Ahmad Yaseen | G1 | Lipid-Associated Macrophages Control Metabolic Homeostasis in a Trem2-Dependent Manner | First week after mid |
2 | 2015-ag-5358 | Ayesha Rafique | |||
3 | 2016-ag-5038 | Ahmad yaar | |||
4 | 2016-ag-5142 | Muhammad Azfar Javed | |||
5 | 2016-ag-5157 | M Qamar ul Islam | |||
6 | 2016-ag-5189 | Muhammad Shahzaib | |||
7 | 2016-ag-5264 | Muhammad Danish | |||
8 | 2016-ag-5265 | Abdal Ali | |||
9 | 2016-ag-5284 | M Ahmad Farhat | |||
10 | 2016-ag-5329 | Sohaib Tariq | |||
11 | 2016-ag-5428 | Eman Fatima | |||
12 | 2016-ag-5435 | Haiqa Yousaf | G2 | Coordinate β-adrenergic inhibition of mitochondrial activity and angiogenesis arrest tumor growth |
First week after mid |
13 | 2016-ag-6208 | Javeria Saddique | |||
14 | 2017-ag-7450 | M. Ali Nawaz | |||
15 | 2017-ag-8833 | Amal Firdos | |||
16 | 2017-ag-9647 | Amara Khalid | |||
17 | 2017-ag-9839 | Mouzzama Akhtar | |||
18 | 2018-ag-6434 | Saleem Aslam | |||
19 | 2018-ag-6526 | Safha Chaudhary | |||
20 | 2018-ag-6546 | Saqib Ali | |||
21 | 2018-ag-6555 | M Wasiq Ali Tariq | |||
22 | 2018-ag-6560 | Usama Khadim | G3 | Protein mimetic amyloid inhibitor potently abrogates cancer-associated mutant p53 aggregation and restores tumor suppressor function | First week after mid |
23 | 2018-ag-6572 | Syed Umar Mehmood | |||
24 | 2018-ag-6630 | Ishfaq Ahmad | |||
25 | 2018-ag-6645 | Ira Cecil | |||
26 | 2018-ag-6672 | Hamza asif | |||
27 | 2018-ag-6691 | Tehreem Shabbir | |||
28 | 2018-ag-6694 | Hadia Anam | |||
29 | 2018-ag-6695 | Saman Rauf | |||
30 | 2018-ag-6696 | Alisha Batool Alvi | |||
31 | 2018-ag-6722 | Ariba Aslam | |||
32 | 2018-ag-6724 | Malaika Saeed | G4 | Rhoifolin from Plumula Nelumbinis exhibits anti cancer efects in pancreatic cancer viaAKT/JNK signaling pathways | First week after mid |
33 | 2018-ag-6739 | Hassan Zia | |||
34 | 2018-ag-6813 | Muhammad Usama | |||
35 | 2018-ag-6820 | Aiza Murtaza | |||
36 | 2018-ag-6851 | Muhammad Awais Ashfaq | |||
37 | 2018-ag-6852 | Abdul Qadeer | |||
38 | 2018-ag-6861 | Abdul Rauf | |||
39 | 2018-ag-6917 | Maryam Murtaza | |||
40 | 2018-ag-6927 | Hafiz Muhammad Abdullah | |||
41 | 2018-ag-6931 | Rina | |||
42 | 2018-ag-6941 | Fiza Dastgheer | |||
43 | 2018-ag-6961 | Muhammad Waqas Khizar | |||
44 | 2018-ag-6994 | Bisma Zulfiqar | |||
45 | 2018-ag-7037 | M.Awais | G5 | Cell-penetrating Alphabody protein scaffolds for intracellular drug targeting | First week after mid |
46 | 2018-ag-7039 | Waqas Ahmad | |||
47 | 2018-ag-7063 | Talha | |||
48 | 2018-ag-7097 | Muhamad Moaaz | |||
49 | 2018-ag-7104 | Muhammad Usman | |||
50 | 2018-ag-7137 | Zoha Adil | |||
51 | 2018-ag-7154 | M.Sufyan | |||
52 | 2018-ag-7156 | Muhammad Umar | |||
53 | 2018-ag-7166 | Babur Ali akbar | |||
54 | 2018-ag-7192 | M.Farooq | G6 | SREBP-1c impairs ULK1 sulfhydration-mediated autophagic flux to promote hepatic steatosis in high-fat-diet-fed mice | First week after mid |
55 | 2018-ag-7202 | Usman Abid Khan | |||
56 | 2018-ag-7224 | M. Ashir Saleem | |||
57 | 2018-ag-7275 | Fiza Masood | |||
58 | 2018-ag-7330 | M. Muabashar | |||
59 | 2018-ag-7349 | Mudaser Liaqat | |||
60 | 2018-ag-7351 | Usama Khalid | |||
61 | 2018-ag-7365 | Aimen Javeed | |||
62 | 2018-ag-7410 | Muhammad Aashir Hameed | |||
63 | 2018-ag-7425 | Fatima Ijaz | |||
64 | 2018-ag-7433 | Ikhlas Shafique | G7 | Insulin- and Lipopolysaccharide-Mediated Signaling in Adipose Tissue Macrophages Regulates Postprandial Glycemia through Akt-mTOR Activation | Second week after mid |
65 | 2018-ag-7436 | Muhammad Taha Junaid Khan | |||
66 | 2018-ag-7440 | Noorulian Fatima | |||
67 | 2018-ag-7446 | Areej Tauqeer | |||
68 | 2018-ag-7455 | Musferah Anwaar | |||
69 | 2018-ag-7458 | Esha Ramzan | |||
70 | 2018-ag-7465 | Umair Murtaza | |||
71 | 2018-ag-7544 | Muhammad Usman Anwar | |||
72 | 2018-ag-7565 | Anam Fatima | |||
73 | 2018-ag-7568 | Zain ul abidin | |||
74 | 2018-ag-7570 | M.Tayyab | G8 | Cell-Autonomous versus Systemic Akt Isoform Deletions Uncovered New Roles for Akt1 and Akt2 in Breast Cancer | Second week after mid |
75 | 2018-ag-7589 | Muhammad Hammad Butt | |||
76 | 2018-ag-8769 | Muhammad Usama | |||
77 | 2018-ag-8798 | Zobia Nawaz | |||
78 | 2022-ag-96 | Ayesha Saleem | |||
79 | 2022-ag-97 | Muhammad Asad Ullah Wahid | |||
80 | 2022-ag-98 | Muhammad Anas | |||
81 | 2022-ag-99 | Aisha Waseem | |||
82 | 2022-ag-100 | Uneeza Javaid | |||
83 | 2022-ag-101 | Ishtiaq Haider | |||
84 | 2022-ag-102 | Humayoun Saif | G9 | Heat Shock Factor 1 Is a Direct Antagonist of AMP-Activated Protein Kinase | Second week after mid |
85 | 2022-ag-103 | Sohaib Nasir | |||
86 | 2022-ag-104 | Muhammad Zohaib | |||
87 | 2022-ag-105 | Ameer Jan | |||
88 | 2022-ag-2311 | Asmara Afraz | |||
89 | 2022-ag-2312 | Aamir Shehzad | |||
90 | 2022-ag-2313 | Maira Akram | |||
91 | 2022-ag-2314 | Shahid Iqbal | |||
92 | 2022-ag-2315 | Muneeb Ur Rehman | |||
93 | 2022-ag-2316 | Ambreen Fatima | |||
94 | 2022-ag-2317 | Rabia Areej Cheema | G10 | PKCα-LSD1-NF-κB-Signaling Cascade Is Crucial for Epigenetic Control of the Inflammatory Response | Second week after mid |
95 | 2022-ag-2319 | Nayab Taskeen | |||
96 | 2022-ag-2321 | Laiba Ashfaq | |||
97 | 2022-ag-2322 | M. Umar Akaram | |||
98 | 2022-ag-2322 | Muhammad Umer Ikram | |||
99 | 2022-ag-2323 | Mamoona Sarfraz Ali | |||
100 | 2022-ag-2324 | Alveena Iqbal | |||
101 | 2022-ag-2325 | Hina Fatima | |||
102 | 2022-ag-2326 | Saeed Rasheed | |||
103 | 2022-ag-2327 | Muhammad Yasir Malik | |||
104 | 2022-ag-2328 | Manahil Atta | |||
105 | 2022-ag-2330 | Sara Qasim | G11 | Metformin Promotes Antitumor Immunity via Endoplasmic-Reticulum-Associated Degradation of PD-L1 | Second week after mid |
106 | 2022-ag-2331 | Ayesha Javed | |||
107 | 2022-ag-2333 | Zanib Fatima | |||
108 | 2022-ag-2334 | Ansa Shafiq | |||
109 | 2022-ag-2335 | Saqiba Kaukab | |||
110 | 2022-ag-2336 | Ammara Moon | |||
111 | 2022-ag-2337 | Muqaddas Batool | |||
112 | 2022-ag-2338 | Maha Akhtar | |||
113 | 2022-ag-2339 | M. Usman | |||
114 | 2022-ag-2340 | Hafiz Nawab Ali | |||
115 | 2022-ag-2341 | Areej Fatima | |||
116 | 2022-ag-2342 | M.Umair | |||
117 | 2022-ag-2343 | Aiza Javed | |||
118 | 2022-ag-2344 | Hafsa Amir | G12 | Lipid Droplet-Derived Monounsaturated Fatty Acids Traffic via PLIN5 to Allosterically Activate SIRT1 | Second week after mid |
119 | 2022-ag-2353 | Kainat Latif | |||
120 | 2022-ag-2354 | Arfa Saifullah | |||
121 | 2022-ag-2360 | Eisha Yasmeen | |||
122 | 2022-ag-2366 | Madiha Muzammil | |||
123 | 2022-ag-2368 | Syeda Anam Akram | |||
124 | 2022-ag-2372 | Maheera Ahmad | |||
125 | 2022-ag-2373 | Abubakar | |||
126 | 2022-ag-2374 | Azma Batool | |||
127 | 2022-ag-2375 | Mudassir Hassan | |||
128 | 2022-ag-2376 | Danial Ali | |||
129 | 2022-ag-2377 | Ayesha Hafiz | |||
Ch-8 (Nucleotides and Nucleic Acid)
https://www.youtube.com/watch?v=8Dg0qYxXSAo&t=1s
Ch-9 (DNA-based information technology)
https://www.youtube.com/watch?v=Hxy9px3crp4&t=671s
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