Mid-term exam syllabus, Biochem-506: Ch-3 and Ch-4 of Lehninger.
Amino acids; Structures of standard and nonstandard amino acids; Specialized biomolecules derived from amino acids; Classification and characteristics, acid-base properties, pKa values, titration curves and isoelectric pH; Covalent structure of proteins; Peptides, sequence, nomenclature and conventions for writing; Merrifield peptide synthesis; Classification, biological functions and properties of proteins; Techniques of protein purification; Salting out, chromatography, electrophoresis, isoelectric focusing; Primary structure of protein and its determination; Secondary structure: a-helix, ß-pleated sheets, ß-bends, super secondary motifs, domains; Tertiary and quaternary structures; Protein folding and diseases of misfolding; Structures and biological functions of myoglobin, hemoglobin, collagen and α-keratin etc;
…. PLUS…. First 200 MCQs from chapters 3 of the book ” MCQs in Biochemistry”. MCQs from the taught concepts and book chapters will also appear in the exam.
Final exam syllabus, Biochem-506: Biodegradation of proteins and role of proteasome; Metabolic fate of amino groups; Nitrogen excretion, urea cycle and its regulation; Pathways of amino acid degradation; Biosynthesis of amino acids; In born errors of amino acid metabolism; Introduction to proteomics: Significance and applications.
…. PLUS…. All MCQs from chapters 3 of the book ” MCQs in Biochemistry”. MCQs from the taught concepts and book chapters will also appear in the exam.
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Assignments and presentations:
- The weightage of the assignment and presentation will be decided later.
- Start preparing your presentations and assignments.
- The presentations will also be started right after the mid-term exam.
- PPT file should not contain any designing/colours other than figures and diagrams.
- Slides should be in 16X9 ratio.
- Fonts of all header should be same and of all other text should be same.
- For detailed guidelines about the presentation of research article, visit: https://www.lifesciencesorg.combiochem-720/
- Download the template ppt file to make your presentation. The link is here (copy this link and paste in a new tab).
- Strictly follow the ppt format and it is better if you write and paste your material in the same ppt file.
K. General Question to be asked during the presentation
- 1) Pathway or importance of gene/technology/discovery
- 2) Rationale
- 3) Conclusion of the full article
- 4) Conclusion of every figure
- 5) New findings presented in the article
- 6) Applications of the findings
- 7) Future prospective
- 8) Applications of the work
- 9) Principle of every technique used in the research article
Moreover, provide me a printed summary of your article containing the above headings given under ‘K’.
L. During Presentations, for EVERY FIGURE and graph, we may ask:
1. The Principle of the experiment.
2. The Reason for doing the experiment/s.
3. The Physiological importance of the figure.
4. The Conclusions of the figure
5. Prepare well objectively and subjectively
Biochem-506: Start preparing your presentations and assignments….. Assignment submission is the first class of next month, October 2022. The presentations will also be started after mid-term exam.
NO EXCUSE WILL BE ACCEPTED
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MCQs will be taken from the text-book and from chapter 3 of the book ” MCQs in Biochemistry”.
Link to download this book is given below:
https://b-ok.cc/dl/1055171/2292c5
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Meeting ID: 316 824 288 013
Passcode: WNyjeA
Microsoft teams will be used whenever online classes will be held. You must make your first name as your registration number.
2017-ag-9382 Haidar Iftikhar
2017-ag-10077 Ahmad Faraz
Link to download the book ( MCQs in Biochemistry) is here.
BIOCHEM-506 BIOCHEMISTRY OF PROTEINS 3(3-0)
Theory
Amino acids; Structures of standard and nonstandard amino acids; Specialized biomolecules derived from amino acids; Classification and characteristics, acid-base properties, pKa values, titration curves and isoelectric pH; Covalent structure of proteins; Peptides, sequence, nomenclature and conventions for writing; Merrifield peptide synthesis; Classification, biological functions and properties of proteins; Techniques of protein purification; Salting out, chromatography, electrophoresis, isoelectric focusing; Primary structure of protein and its determination; Secondary structure: a-helix, ß-pleated sheets, ß-bends, super secondary motifs, domains; Tertiary and quaternary structures; Protein folding and diseases of misfolding; Structures and biological functions of myoglobin, hemoglobin, collagen and α-keratin etc; Biodegradation of proteins and role of proteasome; Metabolic fate of amino groups; Nitrogen excretion, urea cycle and its regulation; Pathways of amino acid degradation; Biosynthesis of amino acids; In born errors of amino acid metabolism; Introduction to proteomics: Significance and applications.
Suggested Readings:
- Stryer, L. 2012. Biochemistry, 7th Edition, W. H. Freeman and Co. Lab Manual in Biochemistry, Immunology and Biotechnology, Arti Nigram, Archana Ayyagari. Tata McGraw-Hill Publishing Company Limited, New Delhi.
- Ferrier, D. R. 2017. Biochemistry: Lippincott’s Illustrated Reviews. 7th Lippincott Williams and Wilkins. U.S.A.
- Nelson, D.L and M.M. Cox. 2017. Lehninger Principles of Biochemistry. 7th ed. WH Freeman & Company, New York, NY, USA.
- Rodwell, V and D. Bender. 2015. Harpers Illustrated Biochemistry. 30th McGraw Hill, New York, USA.
- Voet, D., Voet, J.G and C.W. Pratt. 2013. Fundamentals of Biochemistry, Life at the Molecular Level. 4th John Wiley & Sons. Inc. New York, NY, USA.
Biochem-506,BS Biochem, 5TH, EA-Winter 2022, Dr. Muhammad Ali, 01-09-2022 | ||||
Sr. | Ag No. | Student’s Name | Group # | Topic |
1 | 2020-ag-8632 | Aaima-Tur-Rehman | G1 | Amino acids; Structures of standard and nonstandard amino acids; Specialized biomolecules derived from amino acids; Classification and characteristics, |
2 | 2020-ag-8633 | Aleeha Khurram | ||
3 | 2020-ag-8634 | Amna Abbas | ||
4 | 2020-ag-8635 | Amna Batool | ||
5 | 2020-ag-8636 | Aneeq Munsif | ||
6 | 2020-ag-8637 | Aniqa Alwi | ||
7 | 2020-ag-8638 | Areej Fatima Khan | ||
8 | 2020-ag-8639 | Arham Ali | G2 | acid-base properties, pKa values, titration curves and isoelectric pH; Covalent structure of proteins; |
9 | 2020-ag-8640 | Ayesha Rasheed | ||
10 | 2020-ag-8642 | Bisma Yousaf | ||
11 | 2020-ag-8643 | Esha Anwar | ||
12 | 2020-ag-8644 | Esha Sarwar | ||
13 | 2020-ag-8645 | Faiza Jabeen | ||
14 | 2020-ag-8646 | Hadia Tahir | G3 | Peptides, sequence, nomenclature and conventions for writing; Merrifield peptide synthesis; Classification, biological functions and properties of proteins; |
15 | 2020-ag-8647 | Hamna Chaudhary | ||
16 | 2020-ag-8648 | Hurara Ashraf | ||
17 | 2020-ag-8649 | Ifra Asghar | ||
18 | 2020-ag-8650 | Ifra Asim | ||
19 | 2020-ag-8652 | Iqra Shahid | ||
20 | 2020-ag-8653 | Khadija Zahra | ||
21 | 2020-ag-8654 | Kinza Sameen | G4 | Techniques of protein purification; Salting out, chromatography, electrophoresis, isoelectric focusing; |
22 | 2020-ag-8655 | Laiba Abrar | ||
23 | 2020-ag-8656 | Laiba Kiran | ||
24 | 2020-ag-8657 | Linta Mustafa | ||
25 | 2020-ag-8658 | Mahnoor Muqadas | ||
26 | 2020-ag-8659 | Maleeha Tariq | ||
27 | 2020-ag-8660 | Moattar Fatima | ||
28 | 2020-ag-8661 | Moazim Rehman | G5 | Primary structure of protein and its determination; Secondary structure: a-helix, ß-pleated sheets, ß-bends, super secondary motifs, domains; |
29 | 2020-ag-8662 | Muhammad Awais | ||
30 | 2020-ag-8663 | Muhammad Faizan | ||
31 | 2020-ag-8664 | Muhammad Kashif | ||
32 | 2020-ag-8665 | Muhammad Muneeb Qamar | ||
33 | 2020-ag-8666 | Muhammad Umar | ||
34 | 2020-ag-8667 | Muneeba Naveed | ||
35 | 2020-ag-8668 | Muntaha Fatima | G6 | Tertiary and quaternary structures; Protein folding and diseases of misfolding; Structures and biological functions of myoglobin, hemoglobin, collagen and α-keratin etc |
36 | 2020-ag-8670 | Narmeen Zahra | ||
37 | 2020-ag-8671 | Nashra Nadeem | ||
38 | 2020-ag-8672 | Nimra Ahmad | ||
39 | 2020-ag-8673 | Nirma Sarfraz | ||
40 | 2020-ag-8674 | Noor-ul-Huda | ||
41 | 2020-ag-8675 | Noshaba Naz | ||
42 | 2020-ag-8676 | Rida Zainab | G7 | Biodegradation of proteins and role of proteasome; Metabolic fate of amino groups; Nitrogen excretion, urea cycle and its regulation; Pathways of amino acid degradation; |
43 | 2020-ag-8678 | Romaan Abeer | ||
44 | 2020-ag-8679 | Sadaf Manzoor | ||
45 | 2020-ag-8680 | Sadia Falak | ||
46 | 2020-ag-8681 | Samra Murtaza | ||
47 | 2020-ag-8682 | Shireen Faisal | ||
48 | 2020-ag-8683 | Sufyan Arif | ||
49 | 2020-ag-8684 | Tania Javed | G8 | Biosynthesis of amino acids; In born errors of amino acid metabolism; Introduction to proteomics: Significance and applications. |
50 | 2020-ag-8685 | Tehreem Ali | ||
51 | 2020-ag-8687 | Uqba Sarfraz | ||
52 | 2020-ag-8688 | Usama Bin Imran | ||
53 | 2020-ag-8689 | Zara Asmat | ||
54 | 2020-ag-8690 | Shaloom Suhail |
Biochem-506, BS Biochem, 5TH, EB-Winter 2022, Dr. Ali | ||||
Sr. | Ag No. | Student’s Name | Group # | Topic |
1 | 2020-ag-8641 | Ayesha Zia | G1 | Amino acids; Structures of standard and nonstandard amino acids; Specialized biomolecules derived from amino acids; Classification and characteristics, |
2 | 2020-ag-8691 | Abuhuraira | ||
3 | 2020-ag-8692 | Alishba Tahir | ||
4 | 2020-ag-8693 | Aliza | ||
5 | 2020-ag-8694 | Aneesa Batool | ||
6 | 2020-ag-8695 | Aqsa Sakhawat | ||
7 | 2020-ag-8696 | Atta ur rehman | ||
8 | 2020-ag-8697 | Ayesha Bibi | ||
9 | 2020-ag-8698 | Ayesha Idrees | G2 | acid-base properties, pKa values, titration curves and isoelectric pH; Covalent structure of proteins; |
10 | 2020-ag-8699 | Ayesha Muzammal | ||
11 | 2020-ag-8700 | Ayesha Rana | ||
12 | 2020-ag-8701 | Ayesha shahzadi | ||
13 | 2020-ag-8702 | Bakhtawer Arshad | ||
14 | 2020-ag-8703 | Bisma Najeeb | ||
15 | 2020-ag-8704 | Bismah Zafar | ||
16 | 2020-ag-8705 | Esha Ajmal | G3 | Peptides, sequence, nomenclature and conventions for writing; Merrifield peptide synthesis; Classification, biological functions and properties of proteins; |
17 | 2020-ag-8706 | Fatima Shahid | ||
18 | 2020-ag-8707 | Freeha Farooq | ||
19 | 2020-ag-8708 | Ghulam Abbas | ||
20 | 2020-ag-8709 | Hafiza Amna Farooq | ||
21 | 2020-ag-8710 | Hafsa Saeed | ||
22 | 2020-ag-8711 | Hamna Imran | ||
23 | 2020-ag-8712 | Hurmat e Amna | G4 | Techniques of protein purification; Salting out, chromatography, electrophoresis, isoelectric focusing; |
24 | 2020-ag-8713 | Insha Noreen | ||
25 | 2020-ag-8714 | Jamal shabab Ahmad | ||
26 | 2020-ag-8715 | Javeria Nabeel | ||
27 | 2020-ag-8716 | Jawad Hussain khan | ||
28 | 2020-ag-8718 | Kinza Tariq | ||
29 | 2020-ag-8720 | Maham Aqeel | ||
30 | 2020-ag-8721 | Mahnoor | G5 | Primary structure of protein and its determination; Secondary structure: a-helix, ß-pleated sheets, ß-bends, super secondary motifs, domains; |
31 | 2020-ag-8722 | Mariam Amir | ||
32 | 2020-ag-8723 | Maryam Eman | ||
33 | 2020-ag-8725 | Mohsin Majeed | ||
34 | 2020-ag-8726 | Muhammad Adnan | ||
35 | 2020-ag-8727 | Muhammad Ali Hassan khan | ||
36 | 2020-ag-8728 | Muhammad Fahad | ||
37 | 2020-ag-8729 | Muhammad Hamza | G6 | Tertiary and quaternary structures; Protein folding and diseases of misfolding; Structures and biological functions of myoglobin, hemoglobin, collagen and α-keratin etc |
38 | 2020-ag-8730 | Muhammad Mubeen Yaseen | ||
39 | 2020-ag-8731 | Muhammad Zeeshan | ||
40 | 2020-ag-8732 | Muqadas Rasool | ||
41 | 2020-ag-8733 | Rijja fatima | ||
42 | 2020-ag-8736 | Samia Waqar | ||
43 | 2020-ag-8737 | Saneeya Khalid | ||
44 | 2020-ag-8738 | Shaher yar Hassan chaudhary | G7 | Biodegradation of proteins and role of proteasome; Metabolic fate of amino groups; Nitrogen excretion, urea cycle and its regulation; Pathways of amino acid degradation; |
45 | 2020-ag-8739 | Sidra Rafiq | ||
46 | 2020-ag-8740 | Talha Fareed | ||
47 | 2020-ag-8741 | Tayyaba Mushtaq | ||
48 | 2020-ag-8743 | Wardha Waheed | ||
49 | 2020-ag-8744 | Zahra Zafar | ||
50 | 2020-ag-8745 | Zainab Iqbal | G8 | Biosynthesis of amino acids; In born errors of amino acid metabolism; Introduction to proteomics: Significance and applications. |
51 | 2020-ag-8746 | Zarfeen Fatima | ||
52 | 2020-ag-8747 | Zoya Shahbaz | ||
53 | 2020-ag-8748 | Tuba Naheed | ||
54 | 2020-ag-9638 | Muhammad Hamza Arbi | ||
55 | 2020-ag-9639 | Farzeen Yaseen |
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